The $system block

The $system block sets up a routine for constructing the topology of a system. This block can appear multiple times in the input file.

The input parameters that are set in this block are listed below.

Block parameters

Parameter

Value Type

Description

Remarks

name

string

The name for the system/topology-construction routine.

type

string

The type of the system/topology-construction routine (see Systems and Topologies).

Type gmx

Parameter

Value Type

Description

Remarks

template

path

The path of the topology file to be used as a template.

Note

Parameters that are not listed above can also be supplied. They are not recognized by the program in any special way, but are parsed and made available in the Customization API, together with all the other block parameters, as an InputParameters object.

Example

See Tutorial for a commented example.